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Bad examples of smudgeplot #37

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KamilSJaron opened this issue May 15, 2019 · 3 comments
Open

Bad examples of smudgeplot #37

KamilSJaron opened this issue May 15, 2019 · 3 comments
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smudgeplot_included if smudgeplot was posted with the quesiton / problem

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@KamilSJaron
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KamilSJaron commented May 15, 2019 •
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A collection of smudgeplots that went wrong... (a material for a wiki page showing potential pitfalls)

Types of problems:

  • a problem of input data
  • a problem of input parameters
  • a problem of smudge annotation
@KamilSJaron KamilSJaron added the smudgeplot_included if smudgeplot was posted with the quesiton / problem label May 15, 2019
@KamilSJaron
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KamilSJaron commented May 15, 2019 •
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(problem with data) 2 species, one octoploid, one diploid were mixed together (I accidentally pulled a wrong library from ncbi)

strawberry_smudgeplot

@KamilSJaron
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Ps791_smudgeplot_v0 2 1dev2_smudgeplot_log10

@KamilSJaron KamilSJaron mentioned this issue Jul 21, 2020
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@KamilSJaron
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There are so many bad examples here: #58 (comment)

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