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So\nsomething like `if (abc != NULL) esl_alphabet_Destroy(abc)` can just\nbe `esl_alphabet_Destroy(abc)`.\n\nSame goes for free() itself, in C99-compliant code (C99 7.20.3.2/2).","shortMessageHtmlLink":"Cosmetic changes to Eric's leak fix in esl-construct."}},{"before":"86934e4ee5933967719480fbb8e45a15325f683f","after":"09d1115490da96ebee46feea3dabd829bcece9e6","ref":"refs/heads/develop","pushedAt":"2023-09-08T16:38:47.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"nawrockie","name":"Eric Nawrocki","path":"/nawrockie","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/739302?s=80&v=4"},"commit":{"message":"Merges construct-memleak branch into develop","shortMessageHtmlLink":"Merges construct-memleak branch into develop"}},{"before":"fb6dbac381a50633387e99592f388c95310f2fdc","after":null,"ref":"refs/heads/release-0.48","pushedAt":"2023-08-15T19:08:59.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"cryptogenomicon","name":"Sean Eddy","path":"/cryptogenomicon","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/13557645?s=80&v=4"}},{"before":"281c81377595ef781dff962d9572240406a5e364","after":"07ca83ba9ef0414dba9ce0a9331d465b5eb58f2b","ref":"refs/heads/master","pushedAt":"2023-08-15T19:03:21.000Z","pushType":"push","commitsCount":96,"pusher":{"login":"cryptogenomicon","name":"Sean Eddy","path":"/cryptogenomicon","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/13557645?s=80&v=4"},"commit":{"message":"Merging release-0.49 branch back to master.","shortMessageHtmlLink":"Merging release-0.49 branch back to master."}},{"before":"fce9d5ba13902483d33d0df5a21dc6f118ff0dab","after":"86934e4ee5933967719480fbb8e45a15325f683f","ref":"refs/heads/develop","pushedAt":"2023-08-13T08:15:30.000Z","pushType":"push","commitsCount":3,"pusher":{"login":"cryptogenomicon","name":"Sean Eddy","path":"/cryptogenomicon","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/13557645?s=80&v=4"},"commit":{"message":"Release notes added for 0.49","shortMessageHtmlLink":"Release notes added for 0.49"}},{"before":null,"after":"86934e4ee5933967719480fbb8e45a15325f683f","ref":"refs/heads/release-0.49","pushedAt":"2023-08-13T08:12:34.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"cryptogenomicon","name":"Sean Eddy","path":"/cryptogenomicon","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/13557645?s=80&v=4"},"commit":{"message":"Release notes added for 0.49","shortMessageHtmlLink":"Release notes added for 0.49"}},{"before":"8103652510e0f28afb5353dee1c26fcc618c9ca1","after":"fce9d5ba13902483d33d0df5a21dc6f118ff0dab","ref":"refs/heads/develop","pushedAt":"2023-08-08T17:17:22.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"cryptogenomicon","name":"Sean Eddy","path":"/cryptogenomicon","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/13557645?s=80&v=4"},"commit":{"message":"Fixes icc/mpicc warning about underflow from \"tiny*tiny* in esl_stats_erfc()\n\nThe esl_stats_erfc() function is a backup for systems that don't\nprovide erfc() even though erfc() required by C99 standard. I cribbed\nit, with attribution, from a 1993 open source Sun Microsystems\nimplementation. It defines constants tiny=1e-300 and two=2.0, and for\nvery large or small input x, it returns tiny*tiny or two-tiny,\nrespectively.\n\nI had a compiler warn about underflow on the \"tiny*tiny\" and no duh, I\nagree with the compiler, I'm pretty sure that's a silly\nconstruction. The smallest representable (subnormal) double is\n2^{-1074} ~ 10^{-323}; 10^-{600} must underflow to zero.  two-tiny is\nalso silly because 10^-300 is way smaller than DBL_EPSILON, so\ntwo-tiny is 2. And while we're at it, I'm also pretty sure that\ndefining constants like \"one = 1.00000000000000000000e+00\" is silly\ntoo. 1.0, 2.0, and 0.5 are all exactly representable in IEEE754. Maybe\nSun was trying to work around non-IEEE754 representations at the time?\n\nReplaced those returns with 0.0, 2.0.\nReplaced unnecessary constants \"tiny\", \"half\", \"one\", and \"two\".","shortMessageHtmlLink":"Fixes icc/mpicc warning about underflow from \"tiny*tiny* in esl_stats…"}},{"before":"63296453615f3d4dd93909f62a63111d2b708651","after":"8103652510e0f28afb5353dee1c26fcc618c9ca1","ref":"refs/heads/develop","pushedAt":"2023-08-08T13:06:10.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"cryptogenomicon","name":"Sean Eddy","path":"/cryptogenomicon","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/13557645?s=80&v=4"},"commit":{"message":"Fixes a 5% probability esl_graph_utest failure caused by esl_rnd_Roll(rng, 0)\n\nA recent improvement to esl_rnd_Roll() (c3c149cf, Aug 1) also made it\nrighteously intolerant of n=0 as an argument; you can't roll a 0-sided\ndie. It requires n>=1.\n\nI do seem to have some code that sloppily assumes that\nesl_rnd_Roll(rng, 0) returns 0, which was how the previous macro\nimplementation behaved. Turns out an example was in a\nesl_graph::utest_perfect(), where we do sample a random number of\nextra bipartite graph edges with esl_rnd_Roll(rng, m*m-m), and m can\nsometimes (1/20 probability) be 1. The fix is just to special case\nm==1 there.","shortMessageHtmlLink":"Fixes a 5% probability esl_graph_utest failure caused by esl_rnd_Roll…"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEQD2S9gA","startCursor":null,"endCursor":null}},"title":"Activity · EddyRivasLab/easel"}